My watch list
my.bionity.com  
Login  

International Nucleotide Sequence Database Collaboration



The International Nucleotide Sequence Database Collaboration (INSDC, http://insdc.org) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences. It involves the following computerized databases: DNA Data Bank of Japan (Japan), GenBank (USA) and the EMBL (European Molecular Biology Laboratory, Germany). New and updated data on nucleotide sequences contributed by research teams to each of the three databases are synchronized on a daily basis through continuous interaction between the staff at each the collaborating organizations.

Additional recommended knowledge

The DDBJ/EMBL/GenBank synchronization is maintained according to a number of guidelines which are produced and published by an International Advisory Board [1]. The guidelines consist of a common definition of the feature tables [2] for the databases, which regulate the content and syntax [3] of the database entries, in the form of a common DTD or Document Type Definition.

The syntax is called INSDSeq and its core consists of the letter sequence of the gene expression (amino acid sequence) and the letter sequence for nucleotide bases in the gene or decoded segment. In [4] a DBFetch operation shows a typical INSD entry at the EBI database; the same entry at NCBI is here [5].

See also

 
This article is licensed under the GNU Free Documentation License. It uses material from the Wikipedia article "International_Nucleotide_Sequence_Database_Collaboration". A list of authors is available in Wikipedia.
Your browser is not current. Microsoft Internet Explorer 6.0 does not support some functions on Chemie.DE