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NCI-Nature Pathway Interaction Database
Additional recommended knowledge
As of November 2007, the database contained 59 pathways (comprising 3309 molecular interactions) curated by the NCI-Nature editorial team. New pathways are added each month. The database also contains 254 pathways (comprising 3003 interactions) imported from the June 2004 edition of the BioCarta pathway database. The NCI-Nature curated data is gathered from published research literature and reviewed by expert scientists before publication. Evidence codes are assigned to each molecular interaction, which allows users to evaluate the reliability of the interactions or to search for interactions identified by particular experimental techniques.
Data output and download
The database content can be viewed in self-contained, pre-defined pathways. The database can also dynamically generate interaction networks to visualize the results of database searches. Pathways and dynamically generated networks are displayed in GIF and SVG images and can be downloaded as XML (including the standard pathway interchange format, BioPAX). The entire database is also available for download.
• Pathway Interaction Database • National Cancer Institute • Nature Publishing Group
• An Introduction to the NCI-Nature Pathway Interaction Database • Identification of Key Processes Underlying Cancer Phenotypes Using Biologic Pathway Analysis
• Reactome • UCSD-Nature Molecule Pages • KEGG • BioCarta • HPRD • The Cancer Genome Project • PharmGKB
|This article is licensed under the GNU Free Documentation License. It uses material from the Wikipedia article "NCI-Nature_Pathway_Interaction_Database". A list of authors is available in Wikipedia.|