Analysis of triangular motifs in protein interaction networks and their implications to protein ages and cancer genes
Analysis of triangular motifs in protein interaction networks and their implications to protein ages and cancer genes Hyeonseong Jeon; Suh-Ryung Kim; Dougu Nam; Yun Joo Yoo International Journal of Data Mining and Bioinformatics, Vol. 19, No. 4 (2017) pp. 340 - 365 Proteins interact with each other to regulate their functionality and localisation. The accumulated protein interaction evidences are represented by protein interaction network through a graph abstraction. Topological properties of protein interaction networks have been explored to characterise proteins and predict undiscovered interactions. Meanwhile, many researchers have tried to explain how protein interaction network is formed through evolutionary process. Moreover, the topological properties of protein interaction network are reported to have relationship with cancer-related genes. In this paper, we construct a weighted human protein interaction network based on triangles in protein interaction network and show that there is relationship between triangles in protein interaction network and phylogenetic age of proteins. We also show that triangles in protein interaction network are related to cancer-related genes.
Preselection via classification: a case study on global optimisationJinyuan Zhang; Aimin Zhou; Guixu ZhangInternational Journal of Bio-Inspired Computation, Vol. 11, No. 4 (2018) pp. 267 - 281In evolutionary optimisation, the preselection aims to choose promising solutions from a set of can ... more
Multi-objective bat algorithm for mining numerical association rulesKamel Eddine Heraguemi; Nadjet Kamel; Habiba DriasInternational Journal of Bio-Inspired Computation, Vol. 11, No. 4 (2018) pp. 239 - 248Numerical association rule mining problem attracts the attention of researchers because ... more
A new method to solve optimisation problems via fixed point of firefly algorithmWenXin Yu; JunNian WangInternational Journal of Bio-Inspired Computation, Vol. 11, No. 4 (2018) pp. 249 - 256In this paper, we are going to introduce a novel iteractive method, leading us to find the fixed point ... more